Imports
GenomicRanges, ggplot2, reshape, grid, grDevices, graphics,
methods, parallel, stats, utils, IRanges, Seqinfo, S4Vectors,
GenomicFeatures, TCGAbiolinks (>= 2.23.7), plyr, Matrix, dplyr,
Gviz, ComplexHeatmap, circlize, MultiAssayExperiment,
SummarizedExperiment, biomaRt, doParallel, downloader, ggrepel,
lattice, magrittr, readr, scales, rvest, xml2, plotly,
gridExtra, rmarkdown, stringr, tibble, tidyr, progress, purrr,
reshape2, ggpubr, rtracklayer (>= 1.61.2), DelayedArray
Suggests
BiocStyle, AnnotationHub, ExperimentHub, knitr, testthat,
data.table, DT, GenomicInteractions, webshot, R.utils, covr,
sesameData